D.E.I.S. - UNIVERSITA' DI BOLOGNA
Dipartimento di Elettronica, Informatica e Sistemistica



 

Selected Publication

 

2002 2004 2005 2006 2007 2008

2008

S. Di Cataldo, E. Ficarra, A. Acquaviva, E.Macii,
Segmentation of Nuclei in Cancer Tissue Images: Contrasting Active Contours with Morphology-Based Approach,
Proc. of IEEE 8th Symposium on Bioinformatics and Bioengineering (BIBE2008), Athens, Greece, October 2008, Page(s):

E. Baralis, G. Bruno, E. Ficarra,
Temporal Association Rules for Gene Regulatory Networks,
Proc. of IEEE International Conference on Intelligent Systems (IS2008), Varna, Bulgaria, September, 2008, Page(s):

S. Di Cataldo, E. Ficarra, E.Macii,
Fully automated segmentation of tumor areas in tissue confocal images,
Proc. of IEEE/ACM Biosignals- International Conference on Bio-inspired Systems and Signal Processing, Madeira, Portugal, January 2008, Page(s):116-123

E. Ficarra, G. De Micheli, S. Yoon, L. Benini, E.Macii,
Joint co-clustering: co-clustering of genomic and clinical bioimaging data,
Computers & Mathematics with Applications - Special Issue on Modeling and Computational Methods in Genomics, Ed. Elsevier, Vol.55(5), pp.938-949, 2008, ISSN: 1556-4681(link)

S. DI Cataldo, E. Ficarra, E.Macii,
Automated Discrimination of Pathological Regions in Tissue Images: Unsupervised Clustering vs Supervised SVM Classification,
Communication in Computer and Information Science, Ed. Springer, Vol.(), pp., 2008, ISSN: 1865-0929 (accepted for publication)


2007

S. Di Cataldo, E. Ficarra, E. Macii,
Selection of Tumor Areas and Segmentation of Nuclear Membranes in Tissue Confocal Images: a Fully-Automated Approach,
Proc. of IEEE International conference on Bioinformatics and Biomedicine (BIBM2007), Silicon Valley, CA USA, November 2007, Page(s): 390 - 398

E. Baralis, E. Ficarra, A. Fiori, E. Macii,
Gene-Markers Representation for Microarray Data Integration,
Proc. of IEEE 7th Symposium on Bioinformatics and Bioengineering (BIBE2007), Boston, MA USA, October 2007, Page(s): 1056 - 1060


2006

E.Ficarra, E.Macii, L. Benini, G. De Micheli,
Computer-aided evaluation of protein expression in pathological tissue images,
Proc. of IEEE International Symposium on Computer-Based Medical Systems (CBMS 2006), Salt Lake City, Utah, USA, June 2006

E. Ficarra, G. De Micheli, S. Yoon, L. Benini, E. Macii,

Bioimaging and Clinical Genomics,
Proc. of IEEE phealth International workshop on wearable micro and nanosystems for personalized Health (IEEE), Luzern Switzerland,2006  (link)

E. Ficarra, S. Yoon, L. Benini, E. Macii, G. De Micheli,
Clinical bioimaging and functional genomics,
Proc. Of I FIMA International Conference "Models and Methods for Human Genomics", Ayas-Champoluc, Aosta Valley (Italy), 2006

D. Masotti, E. Ficarra, L. Benini, E.Macii, G. Zuccheri,
Optimized Techniques for DNA structural properties investigation,
International Journal on Artificial Intelligence Tools - JIAIT, World Scientific (SCI), Vol. 15(5), pp.695-709, 2006 (link)

D. Apiletti, G. Bruno, E. Ficarra, E. Baralis,
Data Cleaning and Semantic Improvement in Biological Databases,
Journal of Integrative Bioinformatics - JIB (ISSN 1613-4516) Vol. 3(2):40, 2006 (link)


2005

E. Ficarra, L. Benini, E.Macii, G. Zuccheri,
Automated DNA Fragments Recognition and Sizing through AFM Image Processing,
IEEE Transactions on Information Technology in Biomedicine, Vol.9(4), pp.508-517, 2005 (link)

E. Ficarra, D. Masotti, L. Benini, E.Macii, G. Zuccheri, B. Samorì,
Automatic Intrinsic DNA Curvature Computation from AFM Images,
IEEE Transactions on Biomedical Engineering, Vol.52(12) pp.2074-2086, 2005 (link)


2004

D. Masotti, E. Ficarra, L. Benini, E.Macii,
Techniques for Enhancing Computation of DNA Curvature Molecules,
Proc. of IEEE Fourth Symposium on Bioinformatics and Bioengineering (BIBE2004), Taichung, Taiwan, 2004

E. Ficarra, L. Benini, E.Macii, G. Zuccheri,
A Robust Algorithm for Automated Analysis of DNA Molecules in AFM Images,
Proc. of IASTED Biomedical Engineering (BioMED 2004), Innsbruck, Austria, 2004


2002

E Ficarra, L Benini, B Riccò, G Zuccheri,
Automated Dna Sizing in Atomic Force Microscope images,
Proc. of IEEE International Symposium on Biomedical Imaging (ISBI 2002), Washington DC, USA,2002

E Ficarra, D Masotti, L Benini, M Milano, A Bergia,
Automated Dna curvature profile reconstruction in Atomic Force Microscope images,
AI*IA Notizie, Vol. 4, n. Dec., pp. 64-68 (2002)